ChemFOnt: Showing chemical card for (5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid (CFc000165095)

Record Information

Version

1.0

Creation Date

2022-08-28 10:25:12 UTC

Update Date

2022-09-13 23:57:14 UTC

Chemfont ID

CFc000165095

Molecule Identification

Common Name

(5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid

Definition

(5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid. Based on a literature review very few articles have been published on (5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid.

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
(5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoate	Generator
(5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulphanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoate	Generator
(5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulphanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid	Generator

Chemical Formula

C₃₀H₄₇N₃O₁₀S

Average Molecular Weight

641.78

Monoisotopic Molecular Weight

641.298215899

IUPAC Name

(5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid

Traditional Name

(5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-(carboxymethyl-C-hydroxycarbonimidoyl)ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid

CAS Registry Number

Not Available

SMILES

[H]\C(CCCC(O)=O)=C(/[H])CC1C=CC(=O)C1CC(SCC(N=C(O)CCC(N)C(O)=O)C(O)=NCC(O)=O)C(O)CCCCC

InChI Identifier

InChI=1S/C30H47N3O10S/c1-2-3-6-10-24(35)25(16-20-19(12-14-23(20)34)9-7-4-5-8-11-27(37)38)44-18-22(29(41)32-17-28(39)40)33-26(36)15-13-21(31)30(42)43/h4,7,12,14,19-22,24-25,35H,2-3,5-6,8-11,13,15-18,31H2,1H3,(H,32,41)(H,33,36)(H,37,38)(H,39,40)(H,42,43)/b7-4-

InChI Key

RVZJPUMZIUYQFL-DAXSKMNVSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Eicosanoids

Direct Parent

Prostaglandins and related compounds

Alternative Parents

Substituents

Prostaglandin skeleton
Alpha peptide
N-acyl-alpha-amino acid
N-acyl-alpha amino acid or derivatives
Alpha-amino acid
Alpha-amino acid or derivatives
Tricarboxylic acid or derivatives
Amino acid or derivatives
Ketone
Amino acid
Cyclic ketone
Secondary alcohol
Carboximidic acid
Carboximidic acid derivative
Carboxylic acid derivative
Carboxylic acid
Dialkylthioether
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Sulfenyl compound
Thioether
Hydrocarbon derivative
Primary aliphatic amine
Organic oxide
Organic oxygen compound
Organic nitrogen compound
Amine
Organonitrogen compound
Organooxygen compound
Organosulfur compound
Organopnictogen compound
Primary amine
Carbonyl group
Alcohol
Aliphatic homomonocyclic compound

Molecular Framework

Aliphatic homomonocyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Not Available

Not Available

Not Available

Physical Properties

Predicted Properties

Property	Value	Source
Water Solubility	0.0068 g/L	ALOGPS
logP	-0.42	ALOGPS
logP	0.76	ChemAxon
logS	-5	ALOGPS
pKa (Strongest Acidic)	2	ChemAxon
pKa (Strongest Basic)	9.54	ChemAxon
Physiological Charge	-2	ChemAxon
Hydrogen Acceptor Count	13	ChemAxon
Hydrogen Donor Count	7	ChemAxon
Polar Surface Area	240.4 Å²	ChemAxon
Rotatable Bond Count	24	ChemAxon
Refractivity	166.21 m³·mol⁻¹	ChemAxon
Polarizability	69.51 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

HMDB0184823

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

Showing chemical card for (5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid (CFc000165095)

MOL for CFc000165095 ((5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid)

3D MOL for CFc000165095 ((5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid)

3D SDF for CFc000165095 ((5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid)

3D-SDF for CFc000165095 ((5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid)

PDB for CFc000165095 ((5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid)

3D PDB for CFc000165095 ((5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid)

SMILES for CFc000165095 ((5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid)

INCHI for CFc000165095 ((5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid)

Structure for CFc000165095 ((5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid)

3D Structure for CFc000165095 ((5Z)-7-{5-[2-({2-[(4-amino-4-carboxy-1-hydroxybutylidene)amino]-2-[(carboxymethyl)-C-hydroxycarbonimidoyl]ethyl}sulfanyl)-3-hydroxyoctyl]-4-oxocyclopent-2-en-1-yl}hept-5-enoic acid)