ChemFOnt: Showing chemical card for 3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid (CFc000160575)

Record Information

Version

1.0

Creation Date

2022-08-28 10:25:12 UTC

Update Date

2022-09-13 23:49:15 UTC

Chemfont ID

CFc000160575

Molecule Identification

Common Name

3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid

Definition

3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid belongs to the class of organic compounds known as purine ribonucleoside monophosphates. These are nucleotides consisting of a purine base linked to a ribose to which one monophosphate group is attached. Based on a literature review very few articles have been published on 3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid.

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
3,4,5-Trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylate	Generator

Chemical Formula

C₂₁H₃₀N₅O₁₄P

Average Molecular Weight

607.466

Monoisotopic Molecular Weight

607.152687664

IUPAC Name

3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid

Traditional Name

3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid

CAS Registry Number

Not Available

SMILES

[H]\C(CNC1=C2N=CN(C3OC(COP(O)(O)=O)C(O)C3OC3OC(C(O)C(O)C3O)C(O)=O)C2=NC=N1)=C(\C)CO

InChI Identifier

InChI=1S/C21H30N5O14P/c1-8(4-27)2-3-22-17-10-18(24-6-23-17)26(7-25-10)19-15(11(28)9(38-19)5-37-41(34,35)36)39-21-14(31)12(29)13(30)16(40-21)20(32)33/h2,6-7,9,11-16,19,21,27-31H,3-5H2,1H3,(H,32,33)(H,22,23,24)(H2,34,35,36)/b8-2+

InChI Key

ORAUBYSCNWECOU-KRXBUXKQSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as purine ribonucleoside monophosphates. These are nucleotides consisting of a purine base linked to a ribose to which one monophosphate group is attached.

Kingdom

Organic compounds

Super Class

Nucleosides, nucleotides, and analogues

Class

Purine nucleotides

Sub Class

Purine ribonucleotides

Direct Parent

Purine ribonucleoside monophosphates

Alternative Parents

Substituents

Purine ribonucleoside monophosphate
Pentose-5-phosphate
Pentose phosphate
O-glucuronide
1-o-glucuronide
Glucuronic acid or derivatives
6-alkylaminopurine
O-glycosyl compound
N-glycosyl compound
Glycosyl compound
Monosaccharide phosphate
6-aminopurine
Purine
Imidazopyrimidine
Monoalkyl phosphate
Secondary aliphatic/aromatic amine
Beta-hydroxy acid
Aminopyrimidine
Imidolactam
Alkyl phosphate
Pyrimidine
Pyran
Phosphoric acid ester
Oxane
Organic phosphoric acid derivative
N-substituted imidazole
Monosaccharide
Hydroxy acid
Heteroaromatic compound
Tetrahydrofuran
Imidazole
Azole
Amino acid
Secondary alcohol
Amino acid or derivatives
Oxacycle
Azacycle
Organoheterocyclic compound
Secondary amine
Polyol
Monocarboxylic acid or derivatives
Carboxylic acid
Carboxylic acid derivative
Acetal
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Organonitrogen compound
Carbonyl group
Amine
Alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Not Available

Not Available

Not Available

Physical Properties

Predicted Properties

Property	Value	Source
Water Solubility	2.84 g/L	ALOGPS
logP	-1.1	ALOGPS
logP	-5.6	ChemAxon
logS	-2.3	ALOGPS
pKa (Strongest Acidic)	1.22	ChemAxon
pKa (Strongest Basic)	3.84	ChemAxon
Physiological Charge	-3	ChemAxon
Hydrogen Acceptor Count	17	ChemAxon
Hydrogen Donor Count	9	ChemAxon
Polar Surface Area	288.53 Å²	ChemAxon
Rotatable Bond Count	11	ChemAxon
Refractivity	132.74 m³·mol⁻¹	ChemAxon
Polarizability	55.34 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

HMDB0180167

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

Showing chemical card for 3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid (CFc000160575)

MOL for CFc000160575 (3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid)

3D MOL for CFc000160575 (3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid)

3D SDF for CFc000160575 (3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid)

3D-SDF for CFc000160575 (3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid)

PDB for CFc000160575 (3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid)

3D PDB for CFc000160575 (3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid)

SMILES for CFc000160575 (3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid)

INCHI for CFc000160575 (3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid)

Structure for CFc000160575 (3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid)

3D Structure for CFc000160575 (3,4,5-trihydroxy-6-{[4-hydroxy-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-[(phosphonooxy)methyl]oxolan-3-yl]oxy}oxane-2-carboxylic acid)