ChemFOnt: Showing chemical card for 3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid (CFc000123524)

Record Information

Version

1.0

Creation Date

2022-08-28 10:25:12 UTC

Update Date

2022-09-13 21:49:17 UTC

Chemfont ID

CFc000123524

Molecule Identification

Common Name

3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid

Definition

3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2h-chromen-3-yl)methyl]-2-oxo-2h-chromen-4-yl}oxy)oxane-2-carboxylic acid is a predicted metabolite generated by BioTransformer¹ that is produced by the metabolism of 4-hydroxy-3-[(4-hydroxy-2-oxo-2h-chromen-3-yl)methyl]-2h-chromen-2-one. It is generated by UDP-glucuronosyltransferase 1-1 (P22309) enzyme via an aromatic-OH-glucuronidation reaction. This aromatic-OH-glucuronidation occurs in humans.

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
3,4,5-Trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylate	Generator

Chemical Formula

C₂₅H₂₀O₁₂

Average Molecular Weight

512.423

Monoisotopic Molecular Weight

512.095476084

IUPAC Name

3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid

Traditional Name

3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxochromen-3-yl)methyl]-2-oxochromen-4-yl}oxy)oxane-2-carboxylic acid

CAS Registry Number

Not Available

SMILES

OC1C(O)C(OC2=C(CC3=C(O)C4=CC=CC=C4OC3=O)C(=O)OC3=CC=CC=C23)OC(C1O)C(O)=O

InChI Identifier

InChI=1S/C25H20O12/c26-16-10-5-1-3-7-14(10)34-23(32)12(16)9-13-20(11-6-2-4-8-15(11)35-24(13)33)36-25-19(29)17(27)18(28)21(37-25)22(30)31/h1-8,17-19,21,25-29H,9H2,(H,30,31)

InChI Key

NWDKJHWGRKOVAR-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as coumarin glycosides. These are aromatic compounds containing a carbohydrate moiety glycosidically bound to a coumarin moiety.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Coumarins and derivatives

Sub Class

Coumarin glycosides

Direct Parent

Coumarin glycosides

Alternative Parents

Substituents

Coumarin-4-o-glycoside
Coumarin o-glycoside
1-o-glucuronide
O-glucuronide
Glucuronic acid or derivatives
Hydroxycoumarin
4-hydroxycoumarin
Glycosyl compound
O-glycosyl compound
Benzopyran
1-benzopyran
Pyranone
Beta-hydroxy acid
Pyran
Oxane
Benzenoid
Monosaccharide
Hydroxy acid
Vinylogous acid
Vinylogous ester
Heteroaromatic compound
Secondary alcohol
Lactone
Oxacycle
Organoheterocyclic compound
Polyol
Carboxylic acid derivative
Carboxylic acid
Acetal
Monocarboxylic acid or derivatives
Hydrocarbon derivative
Organic oxygen compound
Organic oxide
Organooxygen compound
Alcohol
Carbonyl group
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Endogenous (HMDB: HMDB0143115)

Process

Not Available

Role

Not Available

Physical Properties

Predicted Properties

Property	Value	Source
Water Solubility	0.57 g/L	ALOGPS
logP	0.97	ALOGPS
logP	-0.038	ChemAxon
logS	-3	ALOGPS
pKa (Strongest Acidic)	3.12	ChemAxon
pKa (Strongest Basic)	-3.7	ChemAxon
Physiological Charge	-2	ChemAxon
Hydrogen Acceptor Count	10	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	189.28 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	121.47 m³·mol⁻¹	ChemAxon
Polarizability	48 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

HMDB0143115

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

Showing chemical card for 3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid (CFc000123524)

MOL for CFc000123524 (3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid)

3D MOL for CFc000123524 (3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid)

3D SDF for CFc000123524 (3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid)

3D-SDF for CFc000123524 (3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid)

PDB for CFc000123524 (3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid)

3D PDB for CFc000123524 (3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid)

SMILES for CFc000123524 (3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid)

INCHI for CFc000123524 (3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid)

Structure for CFc000123524 (3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid)

3D Structure for CFc000123524 (3,4,5-trihydroxy-6-({3-[(4-hydroxy-2-oxo-2H-chromen-3-yl)methyl]-2-oxo-2H-chromen-4-yl}oxy)oxane-2-carboxylic acid)