ChemFOnt: Showing chemical card for 6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid (CFc000120559)

Record Information

Version

1.0

Creation Date

2022-08-28 10:25:12 UTC

Update Date

2022-09-13 21:44:46 UTC

Chemfont ID

CFc000120559

Molecule Identification

Common Name

6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid

Definition

6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4h-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid is a predicted metabolite generated by BioTransformer¹ that is produced by the metabolism of 2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5,7-dihydroxy-4h-chromen-4-one. It is generated by UDP-glucuronosyltransferase 1-1 (P22309) enzyme via an aromatic-OH-glucuronidation reaction. This aromatic-OH-glucuronidation occurs in humans.

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylate	Generator

Chemical Formula

C₃₁H₃₄O₁₂

Average Molecular Weight

598.601

Monoisotopic Molecular Weight

598.205026535

IUPAC Name

6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid

Traditional Name

6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxochromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid

CAS Registry Number

Not Available

SMILES

CC(C)=CCC1=CC(=CC(CC2OC2(C)C)=C1O)C1=CC(=O)C2=C(O)C=C(OC3OC(C(O)C(O)C3O)C(O)=O)C=C2O1

InChI Identifier

InChI=1S/C31H34O12/c1-13(2)5-6-14-7-15(8-16(24(14)34)9-22-31(3,4)43-22)20-12-19(33)23-18(32)10-17(11-21(23)41-20)40-30-27(37)25(35)26(36)28(42-30)29(38)39/h5,7-8,10-12,22,25-28,30,32,34-37H,6,9H2,1-4H3,(H,38,39)

InChI Key

KFDWUJZDJQQTEA-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as flavonoid-7-o-glucuronides. These are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to glucuronic acid at the C7-position.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Flavonoids

Sub Class

Flavonoid glycosides

Direct Parent

Flavonoid-7-O-glucuronides

Alternative Parents

Substituents

Flavonoid-7-o-glucuronide
3'-prenylated flavone
Flavonoid-7-o-glycoside
4'-hydroxyflavonoid
5-hydroxyflavonoid
Flavone
Hydroxyflavonoid
Phenolic glycoside
1-o-glucuronide
O-glucuronide
Glucuronic acid or derivatives
Hexose monosaccharide
Chromone
Glycosyl compound
O-glycosyl compound
Benzopyran
1-benzopyran
Beta-hydroxy acid
Pyranone
1-hydroxy-4-unsubstituted benzenoid
Phenol
1-hydroxy-2-unsubstituted benzenoid
Monocyclic benzene moiety
Benzenoid
Pyran
Hydroxy acid
Monosaccharide
Oxane
Heteroaromatic compound
Vinylogous acid
Secondary alcohol
Organoheterocyclic compound
Acetal
Polyol
Monocarboxylic acid or derivatives
Ether
Oxirane
Dialkyl ether
Carboxylic acid
Carboxylic acid derivative
Oxacycle
Organooxygen compound
Carbonyl group
Organic oxide
Organic oxygen compound
Hydrocarbon derivative
Alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Endogenous (HMDB: HMDB0140150)

Process

Not Available

Role

Not Available

Physical Properties

Predicted Properties

Property	Value	Source
Water Solubility	0.098 g/L	ALOGPS
logP	3.36	ALOGPS
logP	3.24	ChemAxon
logS	-3.8	ALOGPS
pKa (Strongest Acidic)	2.74	ChemAxon
pKa (Strongest Basic)	-3.7	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	12	ChemAxon
Hydrogen Donor Count	6	ChemAxon
Polar Surface Area	195.74 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	152.25 m³·mol⁻¹	ChemAxon
Polarizability	62.3 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

HMDB0140150

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

Showing chemical card for 6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid (CFc000120559)

MOL for CFc000120559 (6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid)

3D MOL for CFc000120559 (6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid)

3D SDF for CFc000120559 (6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid)

3D-SDF for CFc000120559 (6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid)

PDB for CFc000120559 (6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid)

3D PDB for CFc000120559 (6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid)

SMILES for CFc000120559 (6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid)

INCHI for CFc000120559 (6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid)

Structure for CFc000120559 (6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid)

3D Structure for CFc000120559 (6-[(2-{3-[(3,3-dimethyloxiran-2-yl)methyl]-4-hydroxy-5-(3-methylbut-2-en-1-yl)phenyl}-5-hydroxy-4-oxo-4H-chromen-7-yl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid)