ChemFOnt: Showing chemical card for 4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid (CFc000116488)

Record Information

Version

1.0

Creation Date

2022-08-28 10:25:12 UTC

Update Date

2022-09-13 21:38:35 UTC

Chemfont ID

CFc000116488

Molecule Identification

Common Name

4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid

Definition

4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid is a predicted metabolite generated by BioTransformer¹ that is produced by the metabolism of 3,4,5,21,22,23-hexahydroxy-8,18-dioxo-11,12-bis(3,4,5-trihydroxybenzoyloxy)-9,14,17-trioxatetracyclo[17.4.0.0²,⁷.0¹⁰,¹⁵]tricosa-1(23),2,4,6,19,21-hexaen-13-yl 3,4,5-trihydroxy-2-({7,8,9,12,13,14,29,30,33,34,35-undecahydroxy-4,17,25,38-tetraoxo-20-[3,4,5-trihydroxy-2-({3,4,5,11,12,13,22,23-octahydroxy-8,18-dioxo-9,14,17-trioxatetracyclo[17.4.0.0²,⁷.0¹⁰,¹⁵]tricosa-1(23),2,4,6,19,21-hexaen-21-yl}oxy)benzoyloxy]-3,18,21,24,39-pentaoxaheptacyclo[20.17.0.0²,¹⁹.0⁵,¹⁰.0¹¹,¹⁶.0²⁶,³¹.0³²,³⁷]nonatriaconta-5,7,9,11,13,15,26,28,30,32,34,36-dodecaen-28-yl}oxy)benzoate. It is generated by EC.3.1.1.20 enzyme via a hydrolysis-of-glycosylated-condensed-galloyl-groups-pattern7 reaction. This hydrolysis-of-glycosylated-condensed-galloyl-groups-pattern7 occurs in human gut microbiota.

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
4-(6-Carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylate	Generator

Chemical Formula

C₂₇H₂₄O₂₀

Average Molecular Weight

668.469

Monoisotopic Molecular Weight

668.086093173

IUPAC Name

4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid

Traditional Name

4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid

CAS Registry Number

Not Available

SMILES

OCC1OC(O)C(O)C(O)C1OC(=O)C1=CC(O)=C(O)C(O)=C1C1=C(O)C(O)=C(OC2=C(O)C(O)=C(O)C=C2C(O)=O)C=C1C(O)=O

InChI Identifier

InChI=1S/C27H24O20/c28-4-11-23(20(37)21(38)27(44)46-11)47-26(43)6-1-8(29)14(31)17(34)13(6)12-5(24(39)40)3-10(16(33)18(12)35)45-22-7(25(41)42)2-9(30)15(32)19(22)36/h1-3,11,20-21,23,27-38,44H,4H2,(H,39,40)(H,41,42)

InChI Key

DMSIOOPOXJJYTD-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as hydrolyzable tannins. These are tannins with a structure characterized by either of the following models. In model 1, the structure contains galloyl units (in some cases, shikimic acid units) that are linked to diverse polyol carbohydrate-, catechin-, or triterpenoid units. In model 2, contains at least two galloyl units C-C coupled to each other, and do not contain a glycosidically linked catechin unit.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Tannins

Sub Class

Hydrolyzable tannins

Direct Parent

Hydrolyzable tannins

Alternative Parents

Substituents

Hydrolyzable tannin
Biphenol
Diphenylether
Galloyl ester
Gallic acid or derivatives
Hexose monosaccharide
Biphenyl
Gallic acid
P-hydroxybenzoic acid alkyl ester
M-hydroxybenzoic acid ester
P-hydroxybenzoic acid ester
Diaryl ether
Dihydroxybenzoic acid
Hydroxybenzoic acid
Benzoate ester
Benzenetriol
Benzoic acid or derivatives
Benzoic acid
Pyrogallol derivative
Tricarboxylic acid or derivatives
Phenol ether
Catechol
Benzoyl
Phenoxy compound
Phenol
1-hydroxy-4-unsubstituted benzenoid
1-hydroxy-2-unsubstituted benzenoid
Oxane
Monosaccharide
Benzenoid
Monocyclic benzene moiety
Secondary alcohol
Carboxylic acid ester
Hemiacetal
Carboxylic acid
Carboxylic acid derivative
Polyol
Organoheterocyclic compound
Oxacycle
Ether
Primary alcohol
Alcohol
Hydrocarbon derivative
Organic oxide
Organooxygen compound
Organic oxygen compound
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Endogenous (HMDB: HMDB0136079)

Process

Not Available

Role

Not Available

Physical Properties

Predicted Properties

Property	Value	Source
Water Solubility	1.83 g/L	ALOGPS
logP	1.46	ALOGPS
logP	-0.4	ChemAxon
logS	-2.6	ALOGPS
pKa (Strongest Acidic)	3.15	ChemAxon
pKa (Strongest Basic)	-5.7	ChemAxon
Physiological Charge	-2	ChemAxon
Hydrogen Acceptor Count	18	ChemAxon
Hydrogen Donor Count	14	ChemAxon
Polar Surface Area	362.12 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	147.48 m³·mol⁻¹	ChemAxon
Polarizability	58.96 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

HMDB0136079

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

Showing chemical card for 4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid (CFc000116488)

MOL for CFc000116488 (4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid)

3D MOL for CFc000116488 (4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid)

3D SDF for CFc000116488 (4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid)

3D-SDF for CFc000116488 (4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid)

PDB for CFc000116488 (4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid)

3D PDB for CFc000116488 (4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid)

SMILES for CFc000116488 (4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid)

INCHI for CFc000116488 (4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid)

Structure for CFc000116488 (4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid)

3D Structure for CFc000116488 (4-(6-carboxy-2,3,4-trihydroxyphenoxy)-2',3',4',5,6-pentahydroxy-6'-({[4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy}carbonyl)-[1,1'-biphenyl]-2-carboxylic acid)