ChemFOnt: Showing chemical card for 2-trans-4-cis-decadienoyl-CoA (CFc000042756)

Record Information

Version

1.0

Creation Date

2022-08-28 10:25:12 UTC

Update Date

2022-09-13 19:45:26 UTC

Chemfont ID

CFc000042756

Molecule Identification

Common Name

2-trans-4-cis-decadienoyl-CoA

Definition

2-trans-4-cis-decadienoyl-CoA is also known as (2-trans,4-cis)-Deca-2,4-dienoyl-coenzyme A or 2,4-Decadienoyl-CoA. 2-trans-4-cis-decadienoyl-CoA is considered to be slightly soluble (in water) and acidic. 2-trans-4-cis-decadienoyl-CoA is a fatty ester lipid molecule

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
(2-trans,4-cis)-Deca-2,4-dienoyl-coenzyme A	ChEBI
(2E,4Z)-Decadienoyl-CoA	ChEBI
(2t,4C)-Deca-2,4-dienoyl-CoA	ChEBI
2-trans-4-cis-Decadienoyl-CoA	ChEBI
2-trans-4-cis-Decadienoyl-coenzyme A	ChEBI
2,4-Decadienoyl-CoA	MeSH
2-trans,4-cis-Decadienoyl-CoA	MeSH
2,4-Decadienoyl-coenzyme A	MeSH, HMDB

Chemical Formula

C₃₁H₅₀N₇O₁₇P₃S

Average Molecular Weight

917.752

Monoisotopic Molecular Weight

917.219673435

IUPAC Name

{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-2-({[({[(3R)-3-{[2-({2-[(2E,4Z)-deca-2,4-dienoylsulfanyl]ethyl}carbamoyl)ethyl]carbamoyl}-3-hydroxy-2,2-dimethylpropoxy](hydroxy)phosphoryl}oxy)(hydroxy)phosphoryl]oxy}methyl)-4-hydroxyoxolan-3-yl]oxy}phosphonic acid

Traditional Name

2-trans-4-cis-decadienoyl-coa

CAS Registry Number

Not Available

SMILES

CCCCC\C([H])=C(\[H])/C=C/C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C(N)N=CN=C12

InChI Identifier

InChI=1S/C31H50N7O17P3S/c1-4-5-6-7-8-9-10-11-22(40)59-15-14-33-21(39)12-13-34-29(43)26(42)31(2,3)17-52-58(49,50)55-57(47,48)51-16-20-25(54-56(44,45)46)24(41)30(53-20)38-19-37-23-27(32)35-18-36-28(23)38/h8-11,18-20,24-26,30,41-42H,4-7,12-17H2,1-3H3,(H,33,39)(H,34,43)(H,47,48)(H,49,50)(H2,32,35,36)(H2,44,45,46)/b9-8-,11-10+/t20-,24-,25-,26+,30-/m1/s1

InChI Key

FASAKYLWSRDQOH-IMVFQKDNSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as very long-chain fatty acyl coas. These are acyl CoAs where the group acylated to the coenzyme A moiety is a very long aliphatic chain of 22 carbon atoms or more.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acyl thioesters

Direct Parent

Very long-chain fatty acyl CoAs

Alternative Parents

Substituents

Coenzyme a or derivatives
Purine ribonucleoside 3',5'-bisphosphate
Purine ribonucleoside bisphosphate
Purine ribonucleoside diphosphate
Ribonucleoside 3'-phosphate
Pentose phosphate
Pentose-5-phosphate
Glycosyl compound
N-glycosyl compound
6-aminopurine
Monosaccharide phosphate
Organic pyrophosphate
Pentose monosaccharide
Purine
Imidazopyrimidine
Monoalkyl phosphate
Aminopyrimidine
Alkyl phosphate
Imidolactam
Organic phosphoric acid derivative
N-substituted imidazole
Monosaccharide
Pyrimidine
Phosphoric acid ester
Oxolane
Heteroaromatic compound
Azole
Imidazole
Carbothioic s-ester
Amino acid or derivatives
Thiocarboxylic acid ester
Secondary alcohol
Sulfenyl compound
Thiocarboxylic acid or derivatives
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Organoheterocyclic compound
Azacycle
Carboximidic acid
Carboximidic acid derivative
Carboxylic acid derivative
Oxacycle
Organic nitrogen compound
Organic oxygen compound
Organic oxide
Carbonyl group
Primary amine
Alcohol
Hydrocarbon derivative
Organosulfur compound
Organooxygen compound
Amine
Organonitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Exogenous (HMDB: HMDB0062344)

Process

Not Available

Role

Not Available

Physical Properties

Predicted Properties

Property	Value	Source
Water Solubility	2.18 g/L	ALOGPS
logP	1.08	ALOGPS
logP	-3.3	ChemAxon
logS	-2.6	ALOGPS
pKa (Strongest Acidic)	0.83	ChemAxon
pKa (Strongest Basic)	4.95	ChemAxon
Physiological Charge	-4	ChemAxon
Hydrogen Acceptor Count	17	ChemAxon
Hydrogen Donor Count	9	ChemAxon
Polar Surface Area	363.63 Å²	ChemAxon
Rotatable Bond Count	26	ChemAxon
Refractivity	211.25 m³·mol⁻¹	ChemAxon
Polarizability	86.61 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

HMDB0062344

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

6444117

PDB ID

Not Available

ChEBI ID

29119

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

Showing chemical card for 2-trans-4-cis-decadienoyl-CoA (CFc000042756)

MOL for CFc000042756 (2-trans-4-cis-decadienoyl-CoA)

3D MOL for CFc000042756 (2-trans-4-cis-decadienoyl-CoA)

3D SDF for CFc000042756 (2-trans-4-cis-decadienoyl-CoA)

3D-SDF for CFc000042756 (2-trans-4-cis-decadienoyl-CoA)

PDB for CFc000042756 (2-trans-4-cis-decadienoyl-CoA)

3D PDB for CFc000042756 (2-trans-4-cis-decadienoyl-CoA)

SMILES for CFc000042756 (2-trans-4-cis-decadienoyl-CoA)

INCHI for CFc000042756 (2-trans-4-cis-decadienoyl-CoA)

Structure for CFc000042756 (2-trans-4-cis-decadienoyl-CoA)

3D Structure for CFc000042756 (2-trans-4-cis-decadienoyl-CoA)