ChemFOnt: Showing chemical card for L-3-Aminobutyryl-CoA (CFc000007791)

Record Information

Version

1.0

Creation Date

2022-08-28 10:25:12 UTC

Update Date

2022-09-13 18:54:18 UTC

Chemfont ID

CFc000007791

Molecule Identification

Common Name

L-3-Aminobutyryl-CoA

Definition

L-3-Aminobutyryl-CoA is found in the lysine fermentation to acetate and butyrate pathway. L-3-Aminobutyryl-CoA is produced from a reaction between (S)-5-amino-3-oxohexanoate and acetyl-CoA, with acetoacetate as a byproduct. L-3-aminobutyryl-CoA breaks down to form ammonia and crotonyl-CoA, a reaction catalyzed by 3-aminobutyryl-CoA ammonia-lyase.

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
3-Aminobutyryl-CoA	HMDB
3-Aminobutyryl-coenzyme A	HMDB
4-({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-N-[2-({2-[(3-aminobutanoyl)sulfanyl]ethyl}-C-hydroxycarbonimidoyl)ethyl]-2-hydroxy-3,3-dimethylbutanimidate	Generator
4-({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-N-[2-({2-[(3-aminobutanoyl)sulphanyl]ethyl}-C-hydroxycarbonimidoyl)ethyl]-2-hydroxy-3,3-dimethylbutanimidate	Generator
4-({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-N-[2-({2-[(3-aminobutanoyl)sulphanyl]ethyl}-C-hydroxycarbonimidoyl)ethyl]-2-hydroxy-3,3-dimethylbutanimidic acid	Generator

Chemical Formula

C₂₅H₄₃N₈O₁₇P₃S

Average Molecular Weight

852.639

Monoisotopic Molecular Weight

852.167972216

IUPAC Name

{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-2-{[({[(3-{[2-({2-[(3-aminobutanoyl)sulfanyl]ethyl}carbamoyl)ethyl]carbamoyl}-3-hydroxy-2,2-dimethylpropoxy)(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl)oxy]methyl}-4-hydroxyoxolan-3-yl]oxy}phosphonic acid

Traditional Name

[(2R,3S,4R,5R)-2-({[(3-{[2-({2-[(3-aminobutanoyl)sulfanyl]ethyl}carbamoyl)ethyl]carbamoyl}-3-hydroxy-2,2-dimethylpropoxy(hydroxy)phosphoryl)oxy(hydroxy)phosphoryl]oxy}methyl)-5-(6-aminopurin-9-yl)-4-hydroxyoxolan-3-yl]oxyphosphonic acid

CAS Registry Number

None

SMILES

CC(N)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C1N=CN=C2N

InChI Identifier

InChI=1S/C25H43N8O17P3S/c1-13(26)8-16(35)54-7-6-28-15(34)4-5-29-23(38)20(37)25(2,3)10-47-53(44,45)50-52(42,43)46-9-14-19(49-51(39,40)41)18(36)24(48-14)33-12-32-17-21(27)30-11-31-22(17)33/h11-14,18-20,24,36-37H,4-10,26H2,1-3H3,(H,28,34)(H,29,38)(H,42,43)(H,44,45)(H2,27,30,31)(H2,39,40,41)/t13?,14-,18-,19-,20?,24-/m1/s1

InChI Key

CCSDHAPTHIKZLY-LRJFFYKASA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as acyl coas. These are organic compounds containing a coenzyme A substructure linked to an acyl chain.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acyl thioesters

Direct Parent

Acyl CoAs

Alternative Parents

Substituents

Coenzyme a or derivatives
Purine ribonucleoside 3',5'-bisphosphate
Purine ribonucleoside bisphosphate
Purine ribonucleoside diphosphate
Pentose phosphate
Pentose-5-phosphate
Ribonucleoside 3'-phosphate
Beta amino acid or derivatives
Glycosyl compound
N-glycosyl compound
Pentose monosaccharide
Organic pyrophosphate
6-aminopurine
Monosaccharide phosphate
Purine
Imidazopyrimidine
Aminopyrimidine
Monoalkyl phosphate
Monosaccharide
N-acyl-amine
Pyrimidine
Fatty amide
N-substituted imidazole
Organic phosphoric acid derivative
Alkyl phosphate
Imidolactam
Phosphoric acid ester
Azole
Imidazole
Tetrahydrofuran
Heteroaromatic compound
Carbothioic s-ester
Carboxamide group
Thiocarboxylic acid ester
Secondary carboxylic acid amide
Amino acid or derivatives
Secondary alcohol
Oxacycle
Sulfenyl compound
Carboxylic acid derivative
Azacycle
Thiocarboxylic acid or derivatives
Organoheterocyclic compound
Alcohol
Organic oxide
Organic nitrogen compound
Organic oxygen compound
Organonitrogen compound
Carbonyl group
Organopnictogen compound
Primary amine
Amine
Organosulfur compound
Organooxygen compound
Primary aliphatic amine
Hydrocarbon derivative
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Physiological effect

Not Available

Disposition

Biological location

Cellular substructure

Excreta

Biofluid or Excreta

Urine (HMDB: HMDB0012248)

Route of exposure

Enteral

Ingestion (HMDB: HMDB0012248)

Source

Endogenous

Endogenous (HMDB: HMDB0012248)

Animal

Animal (HMDB: HMDB0012248)

Exogenous

Food

Food (HMDB: HMDB0012248)

Animal origin

Poultry

Pheasant (FooDB: FOOD00430)
Squab (FooDB: FOOD00481)
Turkey (FooDB: FOOD00494)
Quail (FooDB: FOOD00541)
Anatidae (FooDB: FOOD00576)
Rock ptarmigan (FooDB: FOOD00597)
Columbidae (Dove, Pigeon) (FooDB: FOOD00610)
Chicken (FooDB: FOOD00329)
Mallard duck (FooDB: FOOD00353)
Emu (FooDB: FOOD00360)
Greylag goose (FooDB: FOOD00368)
Guinea hen (FooDB: FOOD00373)
Ostrich (FooDB: FOOD00422)
Velvet duck (FooDB: FOOD00427)

Lagomorph

Ovis

Sheep (Mutton, Lamb) (FooDB: FOOD00473)

Bovine

Venison

Deer (FooDB: FOOD00524)
Mule deer (FooDB: FOOD00348)
Elk (FooDB: FOOD00359)

Caprae

Domestic goat (FooDB: FOOD00529)

Swine

Domestic pig (FooDB: FOOD00536)
Wild boar (FooDB: FOOD00307)

Equine

Horse (FooDB: FOOD00378)

Exogenous (HMDB: HMDB0012248)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid Peroxidation (HMDB: HMDB0012248)

Biochemical pathway

Metabolic pathway

Fatty Acid Metabolism (HMDB: HMDB0012248)

Lipid metabolism pathway (HMDB: HMDB0012248)

Cellular process

Cell signaling (HMDB: HMDB0012248)

Biochemical process

Lipid transport (HMDB: HMDB0012248)

Role

Biological role

Energy source (HMDB: HMDB0012248)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0012248)

Physical Properties

Predicted Properties

Property	Value	Source
Water Solubility	4.31 g/L	ALOGPS
logP	-0.83	ALOGPS
logP	-8.5	ChemAxon
logS	-2.3	ALOGPS
pKa (Strongest Acidic)	0.83	ChemAxon
pKa (Strongest Basic)	9.56	ChemAxon
Physiological Charge	-3	ChemAxon
Hydrogen Acceptor Count	18	ChemAxon
Hydrogen Donor Count	10	ChemAxon
Polar Surface Area	389.65 Å²	ChemAxon
Rotatable Bond Count	22	ChemAxon
Refractivity	184.69 m³·mol⁻¹	ChemAxon
Polarizability	76.02 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

HMDB0012248

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB028890

KNApSAcK ID

Not Available

Chemspider ID

389464

KEGG Compound ID

C05117

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

440564

PDB ID

Not Available

ChEBI ID

15512

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

Showing chemical card for L-3-Aminobutyryl-CoA (CFc000007791)

MOL for CFc000007791 (L-3-Aminobutyryl-CoA)

3D MOL for CFc000007791 (L-3-Aminobutyryl-CoA)

3D SDF for CFc000007791 (L-3-Aminobutyryl-CoA)

3D-SDF for CFc000007791 (L-3-Aminobutyryl-CoA)

PDB for CFc000007791 (L-3-Aminobutyryl-CoA)

3D PDB for CFc000007791 (L-3-Aminobutyryl-CoA)

SMILES for CFc000007791 (L-3-Aminobutyryl-CoA)

INCHI for CFc000007791 (L-3-Aminobutyryl-CoA)

Structure for CFc000007791 (L-3-Aminobutyryl-CoA)

3D Structure for CFc000007791 (L-3-Aminobutyryl-CoA)